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» A lock-and-key model for protein-protein interactions
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NAR
2006
101views more  NAR 2006»
13 years 6 months ago
Epitome: database of structure-inferred antigenic epitopes
Immunoglobulin molecules specifically recognize particular areas on the surface of proteins. These areas are commonly dubbed B-cell epitopes. The identification of epitopes in pro...
Avner Schlessinger, Yanay Ofran, Guy Yachdav, Burk...
BIRD
2007
Springer
107views Bioinformatics» more  BIRD 2007»
14 years 14 days ago
Prediction of Structurally-Determined Coiled-Coil Domains with Hidden Markov Models
The coiled-coil protein domain is a widespread structural motif known to be involved in a wealth of key interactions in cells and organisms. Coiled-coil recognition and prediction ...
Piero Fariselli, Daniele Molinini, Rita Casadio, A...
BMCBI
2010
95views more  BMCBI 2010»
13 years 6 months ago
Protein structure modelling and evaluation based on a 4-distance description of side-chain interactions
Background: Accurate evaluation and modelling of residue-residue interactions within and between proteins is a key aspect of computational structure prediction including homology ...
Vladimir Potapov, Mati Cohen, Yuval Inbar, Gideon ...
ICPR
2008
IEEE
14 years 21 days ago
Detecting hubs and quasi cliques in scale-free networks
Scale-free networks are believed to closely model most real-world networks. An interesting property of such networks is the existence of so-called hub and community structures. In...
Sriganesh Srihari, Hoong Kee Ng, Kang Ning, Hon Wa...
IJCBDD
2010
127views more  IJCBDD 2010»
13 years 4 months ago
Predicting protein complexes by data integration of different types of interactions
: The explosion of highthroughput interaction data from proteomics studies gives us the opportunity to integrate Protein-Protein Interactions (PPI) from different type of interacti...
Powell Patrick Cheng Tan, Daryanaz Dargahi, Freder...