14 search results - page 1 / 3 » Accelerating HMMer on FPGAs using systolic array based archi... |
IPPS
2009
IEEE
13 years 11 months ago
2009
IEEE
HMMer is a widely-used bioinformatics software package that uses profile HMMs (Hidden Markov Models) to model the primary structure consensus of a family of protein or nucleic aci...
ASAP
2008
IEEE
13 years 11 months ago
2008
IEEE
RNA structure prediction, or folding, is a computeintensive task that lies at the core of several search applications in bioinformatics. We begin to address the need for high-thro...
IPPS
2007
IEEE
13 years 11 months ago
2007
IEEE
1 Profile Hidden Markov Models (profile HMMs) are used as a popular bioinformatics tool for sensitive database searching, e.g. a set of not annotated protein sequences is compared...
ASAP
2007
IEEE
13 years 11 months ago
2007
IEEE
Profile based Hidden Markov Model is a widely used tool in bioinformatics. While being very valuable to biologists, it is extremely compute intensive and suffers from prohibitive...
IPPS
1999
IEEE
13 years 8 months ago
1999
IEEE
An e cient implementations of the main building block in the RSA cryptographic scheme is achieved by mapping a bit-level systolic array for modular exponentiation onto Xilinx FPGAs...