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BMCBI
2007
125views more  BMCBI 2007»
13 years 5 months ago
Identification of discriminative characteristics for clusters from biologic data with InforBIO software
Background: There are a number of different methods for generation of trees and algorithms for phylogenetic analysis in the study of bacterial taxonomy. Genotypic information, suc...
Naoto Tanaka, Masataka Uchino, Satoru Miyazaki, Hi...
BMCBI
2008
125views more  BMCBI 2008»
13 years 5 months ago
XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data
Background: Advances in automated DNA sequencing technology have accelerated the generation of metagenomic DNA sequences, especially environmental ribosomal RNA gene (rDNA) sequen...
Daniel N. Frank
BMCBI
2007
144views more  BMCBI 2007»
13 years 5 months ago
Assessing the ability of sequence-based methods to provide functional insight within membrane integral proteins: a case study an
Background: Efforts to predict functional sites from globular proteins is increasingly common; however, the most successful of these methods generally require structural insight. ...
Dennis R. Livesay, Patrick D. Kidd, Sepehr Eskanda...
BIBM
2010
IEEE
144views Bioinformatics» more  BIBM 2010»
13 years 3 months ago
Identification and quantification of abundant species from pyrosequences of 16S rRNA by consensus alignment
16S rRNA gene profiling has recently been boosted by the development of pyrosequencing methods. A common analysis is to group pyrosequences into Operational Taxonomic Units (OTUs),...
Yuzhen Ye