12 search results - page 2 / 3 » Alternate Representation of Distance Matrices for Characteri... |
RECOMB
2004
Springer
14 years 5 months ago
2004
Springer
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
RECOMB
1999
Springer
13 years 9 months ago
1999
Springer
We consider the problem of identifying common three-dimensional substructures between proteins. Our method is based on comparing the shape of the α-carbon backbone structures of ...
BMCBI
2008
13 years 5 months ago
2008
Background: Residue depth allows determining how deeply a given residue is buried, in contrast to the solvent accessibility that differentiates between buried and solvent-exposed ...
CIBCB
2006
IEEE
13 years 11 months ago
2006
IEEE
– Protein structure prediction is one of the core research areas in bioinformatics. This paper addresses the protein secondary structure prediction problem for the twilight zone ...
RECOMB
2003
Springer
14 years 5 months ago
2003
Springer
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...