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» An Algorithm for Assigning Unique Keys to Metabolic Pathways
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BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
13 years 6 months ago
Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
This paper addresses the protein classification problem, and explores how its accuracy can be improved by using information from time-course gene expression data. The methods are ...
Antonina Mitrofanova, Samantha Kleinberg, Jane Car...
BMCBI
2005
169views more  BMCBI 2005»
13 years 5 months ago
Genetic interaction motif finding by expectation maximization - a novel statistical model for inferring gene modules from synthe
Background: Synthetic lethality experiments identify pairs of genes with complementary function. More direct functional associations (for example greater probability of membership...
Yan Qi 0003, Ping Ye, Joel S. Bader
JCB
2007
118views more  JCB 2007»
13 years 5 months ago
Discovering Topological Motifs Using a Compact Notation
Discovering topological motifs or common topologies in one or more graphs is an important as well as an interesting problem. It had been classically viewed as the subgraph isomorp...
Laxmi Parida
MPC
2010
Springer
246views Mathematics» more  MPC 2010»
13 years 7 months ago
Abstraction of Object Graphs in Program Verification
ion of Object Graphs in Program Verification Yifeng Chen1 and J.W. Sanders2 1 HCST Key Lab at School of EECS, Peking University, China. 2 UNU-IIST, Macao. A set-theoretic formalism...
Yifeng Chen, Jeff W. Sanders
KIVS
2005
Springer
13 years 11 months ago
Measuring Large Overlay Networks - The Overnet Example
Peer-to-peer overlay networks have grown significantly in size and sophistication over the last years. Meanwhile, distributed hash tables (DHT) provide efficient means to create g...
Kendy Kutzner, Thomas Fuhrmann