BIBM 2008 - PDF Preprint Papers

BIBM 2008 IEEE International Conference on Bioinformatics and Biomedicine

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BIBM
2008
IEEE

217views Bioinformatics» more BIBM 2008»

Combining Hierarchical Inference in Ontologies with Heterogeneous Data Sources Improves Gene Function Prediction

13 years 11 months ago

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The study of gene function is critical in various genomic and proteomic ﬁelds. Due to the availability of tremendous amounts of different types of protein data, integrating thes...

Xiaoyu Jiang, Naoki Nariai, Martin Steffen, Simon ...

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Id	Views	Title	Status

1	217	Combining Hierarchical Inference in Ontologies with Heterogeneous Data Sources Improves Gene Function Prediction	claim
2	212	Analysis of Multiplex Gene Expression Maps Obtained by Voxelation	claim
3	175	Integrative Protein Function Transfer Using Factor Graphs and Heterogeneous Data Sources	claim
4	172	Boosting Methods for Protein Fold Recognition: An Empirical Comparison	claim
5	170	Protein Sequence Motif Super-Rule-Tree (SRT) Structure Constructed by Hybrid Hierarchical K-Means Clustering Algorithm	claim
6	159	Probe Design for Compressive Sensing DNA Microarrays	claim
7	145	Meta Analysis of Microarray Data Using Gene Regulation Pathways	claim
8	145	Identifying Interface Elements Implied in Protein-Protein Interactions Using Statistical Tests and Frequent Item Sets	claim
9	144	PhyQL: A Web-Based Phylogenetic Visual Query Engine	claim
10	142	Using Global Sequence Similarity to Enhance Biological Sequence Labeling	claim
11	141	Protein-Protein Interaction Network Alignment by Quantitative Simulation	claim
12	137	Exploring Alternative Splicing Features Using Support Vector Machines	claim
13	134	New Approaches to Compare Phylogenetic Search Heuristics	claim
14	125	On the Role of Local Matching for Efficient Semi-supervised Protein Sequence Classification	claim
15	125	Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic Profiles	claim
16	113	Multi-agent Model Analysis of the Containment Strategy for Avian Influenza (AI) in South Korea	claim
17	113	Towards Site-Based Protein Functional Annotations	claim
18	113	Discovering Frequent Patterns of Functional Associations in Protein Interaction Networks for Function Prediction	claim
19	112	Predicting Protective Linear B-Cell Epitopes Using Evolutionary Information	claim
20	112	Fast Alignments of Metabolic Networks	claim
21	111	Estimating Regulatory Associations of Genomic Loci and Biological Pathways in Lymphoblastoid Cells	claim
22	110	Genome Alignments Using MPI-LAGAN	claim
23	108	Systematic Evaluation of Scaling Methods for Gene Expression Data	claim
24	107	A Functional Network of Yeast Genes Using Gene Ontology Information	claim
25	107	Multiway Clustering for Creating Biomedical Term Sets	claim
26	106	Uncovering Genomic Reassortments among Influenza Strains by Enumerating Maximal Bicliques	claim
27	106	Invariance Kernel of Biological Regulatory Networks	claim
28	105	Energy Profile and Secondary Structure Impact shRNA Efficacy	claim
29	101	Comparing and Clustering Flow Cytometry Data	claim
30	91	Synthetic Biology Design and Analysis: A Case Study of Frequency Entrained Biological Clock	claim

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