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BMCBI
2010
178views more  BMCBI 2010»
13 years 6 months ago
Applications of a formal approach to decipher discrete genetic networks
Background: A growing demand for tools to assist the building and analysis of biological networks exists in systems biology. We argue that the use of a formal approach is relevant...
Fabien Corblin, Eric Fanchon, Laurent Trilling
NAR
2008
175views more  NAR 2008»
13 years 6 months ago
Onto-CC: a web server for identifying Gene Ontology conceptual clusters
The Gene Ontology (GO) vocabulary has been extensively explored to analyze the functions of coexpressed genes. However, despite its extended use in Biology and Medical Sciences, t...
Rocío Romero-Záliz, Coral del Val, J...
SIGMOD
2009
ACM
172views Database» more  SIGMOD 2009»
14 years 23 days ago
Self-organizing tuple reconstruction in column-stores
Column-stores gained popularity as a promising physical design alternative. Each attribute of a relation is physically stored as a separate column allowing queries to load only th...
Stratos Idreos, Martin L. Kersten, Stefan Manegold
WABI
2009
Springer
155views Bioinformatics» more  WABI 2009»
14 years 17 days ago
A Markov Classification Model for Metabolic Pathways
Background: This paper considers the problem of identifying pathways through metabolic networks that relate to a specific biological response. Our proposed model, HME3M, first ide...
Timothy Hancock, Hiroshi Mamitsuka
IEEEPACT
2008
IEEE
14 years 11 days ago
Characterizing and modeling the behavior of context switch misses
One of the essential features in modern computer systems is context switching, which allows multiple threads of execution to time-share a limited number of processors. While very ...
Fang Liu, Fei Guo, Yan Solihin, Seongbeom Kim, Abd...