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» Automated tracking and modeling of microtubule dynamics
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ICASSP
2008
IEEE
13 years 12 months ago
Deformable trellis: open contour tracking in bio-image sequences
This paper presents an open contour tracking method that employs an arc-emission Hidden Markov Model (HMM). The algorithm encodes the shape information of the structure in a spati...
Mehmet Emre Sargin, Alphan Altinok, Kenneth Rose, ...
ISBI
2007
IEEE
13 years 11 months ago
Automated Tracking of Multiple C. Elegans with Articulated Models
We present a method for tracking and distinguishing multiple C. elegans in a video sequence, including when they are in physical contact with one another. The worms are modeled wi...
Kuang-Man Huang, Pamela C. Cosman, William R. Scha...
CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
13 years 11 months ago
Deformable Modeling for Improved Calculation of Molecular Velocities from Single-Particle Tracking
Single-particle tracking provides a powerful technique for measuring dynamic cellular processes on the level of individual molecules. Much recent work has been devoted to using si...
Peter M. Kasson, Mark M. Davis, Axel T. Brüng...
QEST
2007
IEEE
13 years 11 months ago
Automated Analysis of Simulation Traces - Separating Progress from Repetitive Behavior
Among the many stages of a simulation study, debugging a simulation model is the one that is hardly reported on but that may consume a considerable amount of time and effort. In t...
Peter Kemper, Carsten Tepper
IJON
2007
83views more  IJON 2007»
13 years 5 months ago
Neurospaces: Towards automated model partitioning for parallel computers
Parallel computers have the computing power needed to simulate biologically accurate neuronal network models. Partitioning is the process of cutting a model in pieces and assignin...
Hugo Cornelis, Erik De Schutter