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» Bayesian Protein Family Classifier

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ISMB
1998

141views Computational Biology» more ISMB 1998»

Bayesian Protein Family Classifier

13 years 6 months ago

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A Bayesian procedure for the simultaneous alignment and classification of sequences into subclasses is described. This Gibbs sampling algorithm iterates between an alignment step ...

Kunbin Qu, Lee Ann McCue, Charles E. Lawrence

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SNPD
2004

156views Artificial Intelligence» more SNPD 2004»

Using extended phylogenetc profiles and support vector machines for protein family classification

13 years 6 months ago

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We proposed a new approach to compare profiles when the correlations among attributes can be represented as a tree. To account for these correlations, the profile is extended with...

Kishore Narra, Li Liao

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AI
2005
Springer

213views Artificial Intelligence» more AI 2005»

Fast Protein Superfamily Classification Using Principal Component Null Space Analysis

13 years 4 months ago

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Abstract. The protein family classification problem, which consists of determining the family memberships of given unknown protein sequences, is very important for a biologist for ...

Leon French, Alioune Ngom, Luis Rueda

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PR
2006

110views more PR 2006»

Classifying protein sequences using hydropathy blocks

13 years 4 months ago

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The annotation of proteins can be achieved by classifying the protein of interest into a certain known protein family to induce its functional and structural features. This paper ...

De-Shuang Huang, Xing-Ming Zhao, Guang-Bin Huang, ...

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IJIS
2006

115views more IJIS 2006»

Noisy-or classifier

13 years 4 months ago