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NAR
2010
173views more  NAR 2010»
12 years 11 months ago
The Protein Naming Utility: a rules database for protein nomenclature
Generation of syntactically correct and unambiguous names for proteins is a challenging, yet vital task for functional annotation processes. Proteins are often named based on homo...
Johannes Goll, Robert Montgomery, Lauren M. Brinka...
NAR
2011
260views Computer Vision» more  NAR 2011»
12 years 7 months ago
ASD: a comprehensive database of allosteric proteins and modulators
Allostery is the most direct, rapid and efficient way of regulating protein function, ranging from the control of metabolic mechanisms to signaltransduction pathways. However, an ...
Zhimin Huang, Liang Zhu, Yan Cao, Geng Wu, Xinyi L...
CIBCB
2006
IEEE
13 years 10 months ago
E2D: A Novel Tool for Annotating Protein Domains in Expressed Sequence Tags
The vast number of expressed sequence tags (ESTs) in public databases provides an important resource for comparative and functional genomics. A variety of methods based on homology...
Guo-Hsing Lee, Nai-Yu Chuang, Wen-Dar Lin, Chung-D...
BMCBI
2010
139views more  BMCBI 2010»
13 years 4 months ago
TOPSAN: a collaborative annotation environment for structural genomics
Background: Many protein structures determined in high-throughput structural genomics centers, despite their significant novelty and importance, are available only as PDB depositi...
Dana Weekes, S. Sri Krishna, Constantina Bakolitsa...
NAR
2007
155views more  NAR 2007»
13 years 4 months ago
Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
Frequent outbreaks of highly pathogenic avian influenza and the increasing data available for comparative analysis require a central database specialized in influenza viruses (IVs...
Suhua Chang, Jiajie Zhang, Xiaoyun Liao, Xinxing Z...