Sciweavers

28 search results - page 2 / 6
» Combinatorial Problems Arising in SNP and Haplotype Analysis
Sort
View
INFORMS
2010
107views more  INFORMS 2010»
13 years 4 months ago
A Class Representative Model for Pure Parsimony Haplotyping
Haplotyping estimation from aligned Single Nucleotide Polymorphism (SNP) fragments has attracted more and more attention in the recent years due to its importance in analysis of m...
Daniele Catanzaro, Alessandra Godi, Martine Labb&e...
CPM
2004
Springer
145views Combinatorics» more  CPM 2004»
13 years 11 months ago
Computational Problems in Perfect Phylogeny Haplotyping: Xor-Genotypes and Tag SNPs
The perfect phylogeny model for haplotype evolution has been successfully applied to haplotype resolution from genotype data. In this study we explore the application of the perfe...
Tamar Barzuza, Jacques S. Beckmann, Ron Shamir, It...
BMCBI
2008
138views more  BMCBI 2008»
13 years 5 months ago
Inference of haplotypic phase and missing genotypes in polyploid organisms and variable copy number genomic regions
Background: The power of haplotype-based methods for association studies, identification of regions under selection, and ancestral inference, is well-established for diploid organ...
Shu-Yi Su, Jonathan White, David J. Balding, Lachl...
RECOMB
2010
Springer
14 years 19 days ago
The Clark Phase-able Sample Size Problem: Long-Range Phasing and Loss of Heterozygosity in GWAS
A phase transition is taking place today. The amount of data generated by genome resequencing technologies is so large that in some cases it is now less expensive to repeat the exp...
Bjarni V. Halldórsson, Derek Aguiar, Ryan T...
BCB
2010
161views Bioinformatics» more  BCB 2010»
13 years 24 days ago
Genome-wide compatible SNP intervals and their properties
Recent studies suggest that the mammalian genomes can be subdivided in segments within which there is limited haplotype diversity. Understanding the distribution and structure of ...
Jeremy W. Wang, Kyle J. Moore, Qi Zhang, Fernando ...