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ISCA
1995
IEEE
93views Hardware» more  ISCA 1995»
13 years 8 months ago
Optimizing Memory System Performance for Communication in Parallel Computers
Communicationin aparallel systemfrequently involvesmoving data from the memory of one node to the memory of another; this is the standard communication model employedin message pa...
Thomas Stricker, Thomas R. Gross
BMCBI
2010
189views more  BMCBI 2010»
13 years 5 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
PPL
2008
96views more  PPL 2008»
13 years 4 months ago
A Hybrid Shared Memory Execution Model for a Data Parallel Language with I/O
Execution of programs with data parallel language constructs is either based on the fork/join or on the SPMD model. Whereas the former executes a program sequentially and confines...
Clemens Grelck, Steffen Kuthe, Sven-Bodo Scholz
IPPS
2003
IEEE
13 years 10 months ago
Global Communication Optimization for Tensor Contraction Expressions under Memory Constraints
The accurate modeling of the electronic structure of atoms and molecules involves computationally intensive tensor contractions involving large multi-dimensional arrays. The effi...
Daniel Cociorva, Xiaoyang Gao, Sandhya Krishnan, G...
CGO
2004
IEEE
13 years 8 months ago
Compiler Optimization of Memory-Resident Value Communication Between Speculative Threads
Efficient inter-thread value communication is essential for improving performance in Thread-Level Speculation (TLS). Although several mechanisms for improving value communication ...
Antonia Zhai, Christopher B. Colohan, J. Gregory S...