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CGO
2010
IEEE
14 years 15 days ago
Automatic creation of tile size selection models
Tiling is a widely used loop transformation for exposing/exploiting parallelism and data locality. Effective use of tiling requires selection and tuning of the tile sizes. This is...
Tomofumi Yuki, Lakshminarayanan Renganarayanan, Sa...
NOCS
2007
IEEE
13 years 12 months ago
On Characterizing Performance of the Cell Broadband Engine Element Interconnect Bus
Abstract – With the rise of multicore computing, the design of onchip networks (or networks on chip) has become an increasingly important component of computer architecture. The ...
Thomas William Ainsworth, Timothy Mark Pinkston
BMCBI
2005
116views more  BMCBI 2005»
13 years 5 months ago
WEBnm@: a web application for normal mode analyses of proteins
Background: Normal mode analysis (NMA) has become the method of choice to investigate the slowest motions in macromolecular systems. NMA is especially useful for large biomolecula...
Siv Midtun Hollup, Gisle Sælensminde, Nathal...
RECOMB
2008
Springer
14 years 6 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...
FPGA
2008
ACM
136views FPGA» more  FPGA 2008»
13 years 7 months ago
HybridOS: runtime support for reconfigurable accelerators
We present HybridOS, a set of operating system extensions for supporting fine-grained reconfigurable accelerators integrated with general-purpose computing platforms. HybridOS spe...
John H. Kelm, Steven S. Lumetta