Sciweavers

51 search results - page 1 / 11
» Contig selection in physical mapping
Sort
View
RECOMB
2000
Springer
13 years 8 months ago
Contig selection in physical mapping
In physical mapping, one orders a set of genetic landmarks or a library of cloned fragments of DNA according to their position in the genome. Our approach to physical mapping divi...
Steffen Heber, Jens Stoye, Jörg D. Hoheisel, ...
BMCBI
2010
161views more  BMCBI 2010»
13 years 2 months ago
LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes
Background: Physical maps are the substrate of genome sequencing and map-based cloning and their construction relies on the accurate assembly of BAC clones into large contigs that...
Zeev Frenkel, Etienne Paux, David I. Mester, Cathe...
BIBE
2007
IEEE
154views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
A Compartmentalized Approach to the Assembly of Physical Maps
We propose a novel compartmentalized method for the assembly of physical maps from fingerprinted clones. Our assembler exploits the presence of genetic markers at the global leve...
Serdar Bozdag, Timothy J. Close, Stefano Lonardi
CSB
2003
IEEE
152views Bioinformatics» more  CSB 2003»
13 years 10 months ago
A Parallel Genetic Algorithm for Physical Mapping of Chromosomes
Physical map reconstruction in the presence of errors is a central problem in genetics of high computational complexity. A parallel genetic algorithm for a maximum likelihood esti...
Suchendra M. Bhandarkar, Jinling Huang, Jonathan A...
NAR
2000
94views more  NAR 2000»
13 years 4 months ago
INE: a rice genome database with an integrated map view
The Rice Genome Research Program (RGP) launched a large-scale rice genome sequencing in 1998 aimed at decoding all genetic information in rice. A new genome database called INE (I...
Katsumi Sakata, Baltazar A. Antonio, Yoshiyuki Muk...