86 search results - page 2 / 18 » DNA Sequence Design by Dynamic Neighborhood Searches |
BMCBI
2006
13 years 5 months ago
2006
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
APBC
2004
13 years 7 months ago
2004
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
SIGMOD
2004
ACM
14 years 5 months ago
2004
ACM
Growing interest in genomic research has resulted in the creation of huge biological sequence databases. In this paper, we present a hash-based pier model for efficient homology s...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
SAC
2010
ACM
13 years 6 months ago
2010
ACM
Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...