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» Domain Architecture in Homolog Identification
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RECOMB
2006
Springer
14 years 5 months ago
Domain Architecture in Homolog Identification
Homology identification is the first step for many genomic studies. Current methods, based on sequence comparison, can result in a substantial number of mis-assignments due to the ...
Nan Song, R. D. Sedgewick, Dannie Durand
JCB
2007
94views more  JCB 2007»
13 years 4 months ago
Domain Architecture Comparison for Multidomain Homology Identification
Nan Song, R. D. Sedgewick, Dannie Durand
NAR
2008
100views more  NAR 2008»
13 years 4 months ago
DAhunter: a web-based server that identifies homologous proteins by comparing domain architecture
We present DAhunter, a web-based server that identifies homologous proteins by comparing domain architectures, the organization of protein domains. A major obstacle in comparison ...
Byungwook Lee, Doheon Lee
ISMB
1998
13 years 6 months ago
Identification of Divergent Functions in Homologous Proteins by Induction over Conserved Modules
Homologousproteins do not necessarily exhibit identical biochemicalfunction. Despitethis fact, local or global sequence similarity is widely used as an indication of functional id...
Imran Shah, Lawrence Hunter
NAR
2007
128views more  NAR 2007»
13 years 4 months ago
Berkeley Phylogenomics Group web servers: resources for structural phylogenomic analysis
Phylogenomic analysis addresses the limitations of function prediction based on annotation transfer, and has been shown to enable the highest accuracy in prediction of protein mol...
Jake Gunn Glanville, Dan Kirshner, Nandini Krishna...