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» Efficient Seeding Techniques for Protein Similarity Search
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RECOMB
2004
Springer
14 years 5 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
ICIP
2000
IEEE
14 years 6 months ago
Efficient Video Similarity Measurement and Search
We consider the use of meta-data and/or video-domain methods to detect similar videos on the web. Meta-data is extracted from the textual and hyperlink information associated with...
Sen-Ching S. Cheung, Avideh Zakhor
ISMB
2003
13 years 6 months ago
PSI: indexing protein structures for fast similarity search
We consider the problem of finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements). Later, ...
Orhan Çamoglu, Tamer Kahveci, Ambuj K. Sing...
CSB
2003
IEEE
116views Bioinformatics» more  CSB 2003»
13 years 10 months ago
Towards Index-based Similarity Search for Protein Structure Databases
We propose two methods for finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements) of prote...
Orhan Çamoglu, Tamer Kahveci, Ambuj K. Sing...
ADL
2000
Springer
251views Digital Library» more  ADL 2000»
13 years 9 months ago
Efficient Similarity Search in Digital Libraries
Digital libraries are a core information technology. When the stored data is complex, e.g. high-resolution images or molecular protein structures, simple query types like the exac...
Christian Böhm, Bernhard Braunmüller, Ha...