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» Extending the Hardness of RNA Secondary Structure Comparison
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ESCAPE
2007
Springer
251views Algorithms» more  ESCAPE 2007»
13 years 11 months ago
Extending the Hardness of RNA Secondary Structure Comparison
Guillaume Blin, Guillaume Fertin, Irena Rusu, Chri...
BIBE
2006
IEEE
132views Bioinformatics» more  BIBE 2006»
13 years 11 months ago
Simplicity in RNA Secondary Structure Alignment: Towards biologically plausible alignments
Ribonucleic acid (RNA) molecules contain the genetic information that regulates the functions of organisms. Given two different molecules, a preserved function corresponds to a pr...
Rimon Mikhaiel, Guohui Lin, Eleni Stroulia
CIBCB
2009
IEEE
13 years 6 months ago
rnaDesign: Local search for RNA secondary structure design
Abstract-- The RNA secondary structure design (SSD) problem is a recently emerging research topic motivated by applications such as customized drug design and the self-assembly of ...
Denny C. Dai, Herbert H. Tsang, Kay C. Wiese
WABI
2004
Springer
13 years 10 months ago
Novel Tree Edit Operations for RNA Secondary Structure Comparison
We describe an algorithm for comparing two RNA secondary structures coded in the form of trees that introduces two novel operations, called node fusion and edge fusion, besides the...
Julien Allali, Marie-France Sagot
CORR
2008
Springer
120views Education» more  CORR 2008»
13 years 5 months ago
A new distance for high level RNA secondary structure comparison
We describe an algorithm for comparing two RNA secondary structures coded in the form of trees that introduces two new operations, called node fusion and edge fusion, besides the t...
Julien Allali, Marie-France Sagot