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» Flexible mapping of homology onto structure with Homolmapper
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BMCBI
2007
99views more  BMCBI 2007»
13 years 5 months ago
Flexible mapping of homology onto structure with Homolmapper
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
Nathan C. Rockwell, J. Clark Lagarias
ICAPR
2001
Springer
13 years 10 months ago
Grouping via the Matching of Repeated Patterns
Abstract. In this contribution, a novel and robust, geometry-based grouping strategy is proposed. Repeated, planar patterns in special relative positions are detected. The grouping...
Andreas Turina, Tinne Tuytelaars, Theo Moons, Luc ...
DAC
2007
ACM
14 years 6 months ago
Designer-Controlled Generation of Parallel and Flexible Heterogeneous MPSoC Specification
Programming multi-processor systems-on-chip (MPSoC) involves partitioning and mapping of sequential reference code onto multiple parallel processing elements. The immense potentia...
Pramod Chandraiah, Rainer Dömer
BMCBI
2006
159views more  BMCBI 2006»
13 years 5 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
BMCBI
2008
101views more  BMCBI 2008»
13 years 5 months ago
Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related
Background: For many types of analyses, data about gene structure and locations of non-coding regions of genes are required. Although a vast amount of genomic sequence data is ava...
Oliver Keller, Florian Odronitz, Mario Stanke, Mar...