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» From Sequence to Biology: The Impact on Bioinformatics
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BIBM
2008
IEEE
142views Bioinformatics» more  BIBM 2008»
14 years 1 days ago
Using Global Sequence Similarity to Enhance Biological Sequence Labeling
Identifying functionally important sites from biological sequences, formulated as a biological sequence labeling problem, has broad applications ranging from rational drug design ...
Cornelia Caragea, Jivko Sinapov, Drena Dobbs, Vasa...
JCSS
2007
116views more  JCSS 2007»
13 years 5 months ago
The most probable annotation problem in HMMs and its application to bioinformatics
Hidden Markov models (HMMs) are often used for biological sequence annotation. Each sequence feature is represented by a collection of states with the same label. In annotating a ...
Brona Brejová, Daniel G. Brown 0001, Tom&aa...
ESWA
2006
148views more  ESWA 2006»
13 years 5 months ago
Applications of artificial intelligence in bioinformatics: A review
Artificial intelligence (AI) has increasingly gained attention in bioinformatics research and computational molecular biology. With the availability of different types of AI algor...
Zoheir Ezziane
WABI
2007
Springer
123views Bioinformatics» more  WABI 2007»
13 years 11 months ago
Inverse Sequence Alignment from Partial Examples
When aligning biological sequences, the choice of parameter values for the alignment scoring function is critical. Small changes in gap penalties, for example, can yield radically ...
Eagu Kim, John D. Kececioglu
BIBE
2010
IEEE
142views Bioinformatics» more  BIBE 2010»
13 years 17 days ago
Compressed q-Gram Indexing for Highly Repetitive Biological Sequences
The study of compressed storage schemes for highly repetitive sequence collections has been recently boosted by the availability of cheaper sequencing technologies and the flood of...
Francisco Claude, Antonio Fariña, Miguel A....