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» From Text to Pathway: Corpus Annotation for Knowledge Acquis...
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BIBM
2009
IEEE
172views Bioinformatics» more  BIBM 2009»
13 years 11 months ago
Identifying Gene Signatures from Cancer Progression Data Using Ordinal Analysis
—A comprehensive understanding of cancer progression may shed light on genetic and molecular mechanisms of oncogenesis, and it may provide much needed information for effective d...
Yoon Soo Pyon, Jing Li
EDBT
2009
ACM
123views Database» more  EDBT 2009»
14 years 17 days ago
High-performance information extraction with AliBaba
A wealth of information is available only in web pages, patents, publications etc. Extracting information from such sources is challenging, both due to the typically complex langu...
Peter Palaga, Long Nguyen, Ulf Leser, Jörg Ha...
BMCBI
2005
117views more  BMCBI 2005»
13 years 5 months ago
An evaluation of GO annotation retrieval for BioCreAtIvE and GOA
Background: The Gene Ontology Annotation (GOA) database http://www.ebi.ac.uk/GOA aims to provide high-quality supplementary GO annotation to proteins in the UniProt Knowledgebase....
Evelyn Camon, Daniel Barrell, Emily Dimmer, Vivian...
LBM
2007
13 years 7 months ago
Syntactic Features for Protein-Protein Interaction Extraction
Background: Extracting Protein-Protein Interactions (PPI) from research papers is a way of translating information from English to the language used by the databases that store th...
Rune Sætre, Kenji Sagae, Jun-ichi Tsujii
LREC
2010
133views Education» more  LREC 2010»
13 years 7 months ago
Towards a Learning Approach for Abbreviation Detection and Resolution
The explosion of biomedical literature and with it the -uncontrolled- creation of abbreviations presents some special challenges for both human readers and computer applications. ...
Klaar Vanopstal, Bart Desmet, Véronique Hos...