6 search results - page 1 / 2 » GPU Accelerated RNA Folding Algorithm |
ISSPIT
2010
12 years 11 months ago
2010
Graphics processing units (GPU) on commodity video cards have evolved into powerful computational devices. The RNA secondary structure arises from the primary structure and a backb...
ICCS
2009
Springer
13 years 11 months ago
2009
Springer
Many bioinformatics studies require the analysis of RNA or DNA structures. More specifically, extensive work is done to elaborate efficient algorithms able to predict the 2-D fold...
ASAP
2008
IEEE
13 years 11 months ago
2008
IEEE
RNA structure prediction, or folding, is a computeintensive task that lies at the core of several search applications in bioinformatics. We begin to address the need for high-thro...
COCOON
2007
Springer
13 years 11 months ago
2007
Springer
Given an RNA family characterized by conserved sequences and folding constraints, the problem is to search for all the instances of the RNA family in a genomic database. As seed-ba...
RECOMB
2011
Springer
12 years 7 months ago
2011
Springer
Motivation. Current approaches to RNA structure prediction range from physics-based methods, which rely on thousands of experimentally-measured thermodynamic parameters, to machin...