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BMCBI
2006
122views more  BMCBI 2006»
13 years 4 months ago
A multivariate prediction model for microarray cross-hybridization
Background: Expression microarray analysis is one of the most popular molecular diagnostic techniques in the post-genomic era. However, this technique faces the fundamental proble...
Yian A. Chen, Cheng-Chung Chou, Xinghua Lu, Elizab...
APBC
2004
122views Bioinformatics» more  APBC 2004»
13 years 6 months ago
Integrating Biopathway Databases for Large-scale Modeling and Simulation
Biopathway databases have been developed, such as KEGG and EcoCyc, that compile interaction structures of biopathways together with biological annotations. However, these biopathw...
Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, Sato...
BMCBI
2004
323views more  BMCBI 2004»
13 years 4 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
CEC
2007
IEEE
13 years 6 months ago
Multi-population approach to approximate the development of neocortical networks
— Cultured natural cortical neurons form functional networks through a complex set of developmental steps during the first weeks in vitro. The dynamic behavior of the network in...
Andreas Herzog, Karsten Kube, Bernd Michaelis, Ana...
SDM
2007
SIAM
143views Data Mining» more  SDM 2007»
13 years 6 months ago
Less is More: Compact Matrix Decomposition for Large Sparse Graphs
Given a large sparse graph, how can we find patterns and anomalies? Several important applications can be modeled as large sparse graphs, e.g., network traffic monitoring, resea...
Jimeng Sun, Yinglian Xie, Hui Zhang, Christos Falo...