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» Genetic Algorithms for Protein Threading
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ISMB
1998
13 years 6 months ago
Genetic Algorithms for Protein Threading
Jacqueline Yadgari, Amihood Amir, Ron Unger
APBC
2004
123views Bioinformatics» more  APBC 2004»
13 years 6 months ago
Empirical Knowledge and Genetic Algorithms for Selection of Amide I Frequencies in Protein Secondary Structure Prediction
Here we investigate an extension of a previously suggested "automatic amide I frequency selection procedure" where we introduce an additional criterion utilizing empiric...
Joachim A. Hering, Peter R. Innocent, Parvez I. Ha...
29
Voted
BIBE
2010
IEEE
194views Bioinformatics» more  BIBE 2010»
13 years 1 months ago
Improved Immune Genetic Algorithm for Clustering Protein-Protein Interaction Network
Hamid Ravaee, Ali Masoudi-Nejad, Saeed Omidi, Ali ...
WABI
2005
Springer
109views Bioinformatics» more  WABI 2005»
13 years 10 months ago
Optimal Protein Threading by Cost-Splitting
Abstract. In this paper, we use integer programming approach for solving a hard combinatorial optimization problem, namely protein threading. For this sequence-to-structure alignme...
Philippe Veber, Nicola Yanev, Rumen Andonov, Vince...
AE
2005
Springer
13 years 10 months ago
An Enhanced Genetic Algorithm for Protein Structure Prediction Using the 2D Hydrophobic-Polar Model
This paper presents an enhanced genetic algorithm for the protein structure prediction problem. A new fitness function, that uses the concept of radius of gyration, is proposed. Al...
Heitor S. Lopes, Marcos P. Scapin