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» Haplotype reconstruction from SNP alignment

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RECOMB
2003
Springer

103views Computational Biology» more RECOMB 2003»

Haplotype reconstruction from SNP alignment

14 years 5 months ago

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In this paper, we describe a method for statistical reconstruction of haplotypes from a set of aligned SNP fragments. We consider the case of a pair of homologous human chromosome...

Lei Li, Jong Hyun Kim, Michael S. Waterman

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CANDC
2005
ACM

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Haplotype assembly from aligned weighted SNP fragments

13 years 4 months ago

Download madis1.iss.ac.cn

Given an assembled genome of a diploid organism the haplotype assembly problem can be formulated as retrieval of a pair of haplotypes from a set of aligned weighted SNP fragments....

Yu-Ying Zhao, Ling-Yun Wu, Ji-Hong Zhang, Rui-Shen...

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ALGORITHMICA
2007

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The Complexity of the Single Individual SNP Haplotyping Problem

13 years 4 months ago

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— We present several new results pertaining to haplotyping. These results concern the combinatorial problem of reconstructing haplotypes from incomplete and/or imperfectly sequen...

Rudi Cilibrasi, Leo van Iersel, Steven Kelk, John ...

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APBC
2008

232views Bioinformatics» more APBC 2008»

Linear Time Probabilistic Algorithms for the Singular Haplotype Reconstruction Problem from SNP Fragments

13 years 6 months ago

Download www.comp.nus.edu.sg

Zhixiang Chen, Bin Fu, Robert T. Schweller, Boting...

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