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» Hardware Acceleration of HMMER on FPGAs
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AINA
2006
IEEE
13 years 9 months ago
Accelerating HMMer searches on Opteron processors with minimally invasive recoding
HMMer is a widely used tool for protein sequence homology detection, as well as functional annotation of homologous protein sequences, and protein family classification. The HMMer...
Joseph I. Landman, Joydeep Ray, John Paul Walters
ARC
2010
Springer
138views Hardware» more  ARC 2010»
13 years 8 months ago
Space and Time Sharing of Reconfigurable Hardware for Accelerated Parallel Processing
High-Performance Reconfigurable Computers (HPRCs) are parallel machines consisting of FPGAs and microprocessors, with the FPGAs used as co-processors. The execution of parallel app...
Esam El-Araby, Vikram K. Narayana, Tarek A. El-Gha...
FPL
1999
Springer
88views Hardware» more  FPL 1999»
13 years 9 months ago
Accelerating Boolean Implications with FPGAs
Kolja Sulimma, Dominik Stoffel, Wolfgang Kunz
DATE
2005
IEEE
187views Hardware» more  DATE 2005»
13 years 11 months ago
Cycle Accurate Binary Translation for Simulation Acceleration in Rapid Prototyping of SoCs
In this paper, the application of a cycle accurate binary translator for rapid prototyping of SoCs will be presented. This translator generates code to run on a rapid prototyping ...
Jürgen Schnerr, Oliver Bringmann, Wolfgang Ro...