Sciweavers

13 search results - page 2 / 3
» High Performance FFT on SGI Altix 3700
Sort
View
FPL
2008
Springer
180views Hardware» more  FPL 2008»
13 years 7 months ago
Compiled hardware acceleration of Molecular Dynamics code
The objective of Molecular Dynamics (MD) simulations is to determine the shape of a molecule in a given biomolecular environment. These simulations are very demanding computationa...
Jason R. Villarreal, Walid A. Najjar
JPDC
2010
106views more  JPDC 2010»
13 years 4 months ago
Feedback-directed page placement for ccNUMA via hardware-generated memory traces
Non-uniform memory architectures with cache coherence (ccNUMA) are becoming increasingly common, not just for large-scale high performance platforms but also in the context of mul...
Jaydeep Marathe, Vivek Thakkar, Frank Mueller
FPL
2008
Springer
150views Hardware» more  FPL 2008»
13 years 7 months ago
Compiler generated systolic arrays for wavefront algorithm acceleration on FPGAs
Wavefront algorithms, such as the Smith-Waterman algorithm, are commonly used in bioinformatics for exact local and global sequence alignment. These algorithms are highly computat...
Betul Buyukkurt, Walid A. Najjar
IJHPCA
2008
131views more  IJHPCA 2008»
13 years 5 months ago
De Novo Ultrascale Atomistic Simulations On High-End Parallel Supercomputers
We present a de novo hierarchical simulation framework for first-principles based predictive simulations of materials and their validation on high-end parallel supercomputers and ...
Aiichiro Nakano, Rajiv K. Kalia, Ken-ichi Nomura, ...
CF
2006
ACM
13 years 9 months ago
Performance characteristics of an adaptive mesh refinement calculation on scalar and vector platforms
Adaptive mesh refinement (AMR) is a powerful technique that reduces the resources necessary to solve otherwise intractable problems in computational science. The AMR strategy solv...
Michael L. Welcome, Charles A. Rendleman, Leonid O...