28 search results - page 2 / 6 » Impact of multicores on large-scale molecular dynamics simul... |
ASAP
2009
IEEE
14 years 2 months ago
2009
IEEE
—Molecular dynamics simulation based on discrete event simulation (DMD) is emerging as an alternative to time-step driven molecular dynamics (MD). DMD uses simplified discretize...
HIPC
2009
Springer
13 years 2 months ago
2009
Springer
Large scale compute clusters continue to grow to ever-increasing proportions. However, as clusters and applications continue to grow, the Mean Time Between Failures (MTBF) has redu...
FPL
2009
Springer
13 years 8 months ago
2009
Springer
The acceleration of molecular dynamics (MD) simulations using high performance reconfigurable computing (HPRC) has been much studied. Given the intense competition from multicore...
IPPS
2006
IEEE
13 years 11 months ago
2006
IEEE
The Replica Exchange method is a popular approach for studying the folding thermodynamics of small to modest size proteins in explicit solvent, since it is easily parallelized. Ho...
IPPS
2007
IEEE
13 years 11 months ago
2007
IEEE
1 Biological processes occurring inside cell involve multiple scales of time and length; many popular theoretical and computational multi-scale techniques utilize biomolecular simu...