Sciweavers

15 search results - page 1 / 3
» Implementation of a programmable array processor architectur...
Sort
View
IPPS
2006
IEEE
13 years 10 months ago
Implementation of a programmable array processor architecture for approximate string matching algorithms on FPGAs
Approximate string matching problem is a common and often repeated task in information retrieval and bioinformatics. This paper proposes a generic design of a programmable array p...
Panagiotis D. Michailidis, Konstantinos G. Margari...
JSA
2008
124views more  JSA 2008»
13 years 4 months ago
Processor array architectures for flexible approximate string matching
In this paper, we present linear processor array architectures for flexible approximate string matching. These architectures are based on parallel realization of dynamic programmi...
Panagiotis D. Michailidis, Konstantinos G. Margari...
IPPS
2009
IEEE
13 years 11 months ago
Input-independent, scalable and fast string matching on the Cray XMT
String searching is at the core of many security and network applications like search engines, intrusion detection systems, virus scanners and spam filters. The growing size of o...
Oreste Villa, Daniel G. Chavarría-Miranda, ...
DSD
2005
IEEE
123views Hardware» more  DSD 2005»
13 years 10 months ago
Hardware-Based Implementation of the Common Approximate Substring Algorithm
An implementation of an algorithm for string matching, commonly used in DNA string analysis, using configurable technology is proposed. The design of the circuit allows for pipeli...
Kenneth B. Kent, Sharon Van Schaick, Jacqueline E....
BMCBI
2008
214views more  BMCBI 2008»
13 years 4 months ago
Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research
Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
Yoginder S. Dandass, Shane C. Burgess, Mark Lawren...