55 search results - page 1 / 11 » Improved Pattern-Driven Algorithms for Motif Finding in DNA ... |
RECOMB
2005
Springer
14 years 5 months ago
2005
Springer
Abstract. In order to guarantee that the optimal motif is found, traditional pattern-driven approaches perform an exhaustive search over all candidate motifs of length l. We develo...
BMCBI
2007
13 years 5 months ago
2007
Background: Motif discovery aims to detect short, highly conserved patterns in a collection of unaligned DNA or protein sequences. Discriminative motif finding algorithms aim to i...
BMCBI
2007
13 years 5 months ago
2007
Background: Unraveling the mechanisms that regulate gene expression is a major challenge in biology. An important task in this challenge is to identify regulatory elements, especi...
RECOMB
2002
Springer
14 years 5 months ago
2002
Springer
We introduce the notion of a multiprofile and use it for finding subtle motifs in DNA sequences. Multiprofiles generalize the notion of a profile and allow one to detect subtle co...
CSB
2003
IEEE
13 years 10 months ago
2003
IEEE
Codon optimization enhances the efficiency of DNA expression vectors used in DNA vaccination and gene therapy by increasing protein expression. Additionally, certain nucleotide mo...