29 search results - page 4 / 6 » Improvement in accuracy of multiple sequence alignment using... |
BIBE
2006
IEEE
13 years 11 months ago
2006
IEEE
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...
IPPS
2006
IEEE
13 years 11 months ago
2006
IEEE
Multiple sequence alignment is a fundamental and very computationally intensive task in molecular biology. MUSCLE, a new algorithm for creating multiple alignments of protein sequ...
WABI
2005
Springer
13 years 11 months ago
2005
Springer
In contrast to proteins, many classes of functionally related RNA molecules show a rather weak sequence conservation but instead a fairly well conserved secondary structure. Hence ...
BMCBI
2008
13 years 5 months ago
2008
Background: The prediction of a consensus structure for a set of related RNAs is an important first step for subsequent analyses. RNAalifold, which computes the minimum energy str...
IWANN
2009
Springer
13 years 12 months ago
2009
Springer
Abstract. This paper proposes a novel algorithm for complete exact patternmatching focusing the specificities of protein sequences (alphabet of 20 symbols) but, also highly efficie...