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» Inheriting from a Common Abstract Ancestor in Timor
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ASM
2003
ASM
13 years 11 months ago
A Framework for Proving Contract-Equipped Classes
r in: Abstract State Machines 2003 — Advances in Theory and Applications, Proc. 10th International Workshop, Taormina, Italy, March 3-7, 2003, eds. Egon Boerger, Angelo Gargantin...
Bertrand Meyer
RECOMB
2005
Springer
14 years 6 months ago
Reconstruction of Reticulate Networks from Gene Trees
Abstract. One of the simplest evolutionary models has molecular sequences evolving from a common ancestor down a bifurcating phylogenetic tree, experiencing point-mutations along t...
Daniel H. Huson, Tobias H. Klöpper, Pete J. L...
ISBRA
2009
Springer
14 years 24 days ago
Prediction of Contiguous Regions in the Amniote Ancestral Genome
Abstract. We investigate the problem of inferring contiguous ancestral regions (CARs) of the genome of the last common ancestor of all extant amniotes, based on the currently seque...
Aïda Ouangraoua, Frédéric Boyer...
ISAAC
2009
Springer
127views Algorithms» more  ISAAC 2009»
14 years 17 days ago
Maximal Strip Recovery Problem with Gaps: Hardness and Approximation Algorithms
Abstract. Given two comparative maps, that is two sequences of markers each representing a genome, the Maximal Strip Recovery problem (MSR) asks to extract a largest sequence of ma...
Laurent Bulteau, Guillaume Fertin, Irena Rusu
EVOW
2008
Springer
13 years 7 months ago
Reactive Stochastic Local Search Algorithms for the Genomic Median Problem
Abstract. The genomic median problem is an optimization problem inspired by a biological issue: it aims at finding the chromosome organization of the common ancestor to multiple li...
Renaud Lenne, Christine Solnon, Thomas Stützl...