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BICOB
2009
Springer
13 years 12 months ago
Assembly of Large Genomes from Paired Short Reads
The de novo assembly of genomes from high-throughput short reads is an active area of research. Several promising methods have been recently developed, with applicability mainly re...
Benjamin G. Jackson, Patrick S. Schnable, Srinivas...
CF
2009
ACM
13 years 11 months ago
Mapping the LU decomposition on a many-core architecture: challenges and solutions
Recently, multi-core architectures with alternative memory subsystem designs have emerged. Instead of using hardwaremanaged cache hierarchies, they employ software-managed embedde...
Ioannis E. Venetis, Guang R. Gao
BMCBI
2007
152views more  BMCBI 2007»
13 years 5 months ago
Recodon: Coalescent simulation of coding DNA sequences with recombination, migration and demography
Background: Coalescent simulations have proven very useful in many population genetics studies. In order to arrive to meaningful conclusions, it is important that these simulation...
Miguel Arenas, David Posada
IEEEPACT
2006
IEEE
13 years 11 months ago
Complexity-based program phase analysis and classification
Modeling and analysis of program behavior are at the foundation of computer system design and optimization. As computer systems become more adaptive, their efficiency increasingly...
Chang-Burm Cho, Tao Li