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» Key Features of the UCSC Genome Site
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CSB
2005
IEEE
136views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Key Features of the UCSC Genome Site
The UCSC Genome site has been contributing to the public genomics community for over 5 years. We wish to highlight the key features, both new and old.
Heather Trumbower, Jennifer Jackson
NAR
2008
159views more  NAR 2008»
13 years 4 months ago
The UCSC Genome Browser Database: 2008 update
The University of California, Santa Cruz, Genome Browser Database (GBD) provides integrated sequence and annotation data for a large collection of vertebrate and model organism ge...
Donna Karolchik, Robert M. Kuhn, Robert Baertsch, ...
BMCBI
2010
112views more  BMCBI 2010»
13 years 5 months ago
TabSQL: a MySQL tool to facilitate mapping user data to public databases
Background: With advances in high-throughput genomics and proteomics, it is challenging for biologists to deal with large data files and to map their data to annotations in public...
Xiaoqin Xia, Michael McClelland, Yipeng Wang
BMCBI
2008
121views more  BMCBI 2008»
13 years 5 months ago
BioSAVE: Display of scored annotation within a sequence context
Background: Visualization of sequence annotation is a common feature in many bioinformatics tools. For many applications it is desirable to restrict the display of such annotation...
Richard F. Pollock, Boris Adryan
BMCBI
2008
102views more  BMCBI 2008»
13 years 5 months ago
Fast splice site detection using information content and feature reduction
Background: Accurate identification of splice sites in DNA sequences plays a key role in the prediction of gene structure in eukaryotes. Already many computational methods have be...
A. K. M. A. Baten, Saman K. Halgamuge, Bill C. H. ...