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    BIOCOMP
    2008
    146views Bioinformatics» more  BIOCOMP 2008»
    Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
    13 years 6 months ago
    Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
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    Background: Inferring a gene regulatory network (GRN) from high throughput biological data is often an under-determined problem and is a challenging task due to the following reas...
    Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
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    BMCBI
    2005
    169views more  BMCBI 2005»
    Genetic interaction motif finding by expectation maximization - a novel statistical model for inferring gene modules from synthe
    13 years 5 months ago
    Genetic interaction motif finding by expectation maximization - a novel statistical model for inferring gene modules from synthe
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    Background: Synthetic lethality experiments identify pairs of genes with complementary function. More direct functional associations (for example greater probability of membership...
    Yan Qi 0003, Ping Ye, Joel S. Bader
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    RECOMB
    2003
    Springer
    181views Computational Biology» more  RECOMB 2003»
    An integrated probabilistic model for functional prediction of proteins
    14 years 5 months ago
    An integrated probabilistic model for functional prediction of proteins
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    We develop an integrated probabilistic model to combine protein physical interactions, genetic interactions, highly correlated gene expression network, protein complex data, and d...
    Minghua Deng, Ting Chen, Fengzhu Sun
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    BMCBI
    2007
    133views more  BMCBI 2007»
    Semantic integration to identify overlapping functional modules in protein interaction networks
    13 years 5 months ago
    Semantic integration to identify overlapping functional modules in protein interaction networks
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    Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
    Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...
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    JIB
    2006
    220views more  JIB 2006»
    An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
    13 years 5 months ago
    An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
    Download  journal.imbio.de
    Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
    Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...
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