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RECOMB
2009
Springer
14 years 5 months ago
Searching Protein 3-D Structures in Linear Time
Finding similar structures from 3-D structure databases of proteins is becoming more and more important issue in the post-genomic molecular biology. To compare 3-D structures of tw...
Tetsuo Shibuya
PVLDB
2010
121views more  PVLDB 2010»
12 years 11 months ago
Efficient RkNN Retrieval with Arbitrary Non-Metric Similarity Measures
A RkNN query returns all objects whose nearest k neighbors contain the query object. In this paper, we consider RkNN query processing in the case where the distances between attri...
Deepak P, Prasad Deshpande
BMCBI
2010
142views more  BMCBI 2010»
13 years 4 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
ICCV
2007
IEEE
14 years 6 months ago
Conditional State Space Models for Discriminative Motion Estimation
We consider the problem of predicting a sequence of real-valued multivariate states from a given measurement sequence. Its typical application in computer vision is the task of mo...
Minyoung Kim, Vladimir Pavlovic
BCB
2010
166views Bioinformatics» more  BCB 2010»
12 years 11 months ago
Fast graph approaches to measure influenza transmission across geographically distributed host types
Recent advances in next generation sequencing are providing a number of large whole-genome sequence datasets stemming from globally distributed disease occurrences. This offers an...
Adrienne Breland, Karen Schlauch, Mehmet Hadi Gune...