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» Mining Complex Patterns from Protein Surfaces
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JBI
2008
137views Bioinformatics» more  JBI 2008»
13 years 5 months ago
Mining sequential patterns for protein fold recognition
Protein data contain discriminative patterns that can be used in many beneficial applications if they are defined correctly. In this work sequential pattern mining (SPM) is utiliz...
Themis P. Exarchos, Costas Papaloukas, Christos La...
PAKDD
2007
ACM
109views Data Mining» more  PAKDD 2007»
13 years 11 months ago
A Language and a Visual Interface to Specify Complex Spatial Patterns
The emerging interests in spatial pattern mining lead to the demand for a flexible spatial pattern mining language, on which easy to use and understand visual pattern language cou...
Xiaohui Li, Yan Huang
BMCBI
2005
115views more  BMCBI 2005»
13 years 5 months ago
SUPERFICIAL - Surface mapping of proteins via structure-based peptide library design
Background: The determination of protein surfaces and the detection of binding sites are essential to our understanding of protein-protein interactions. Such binding sites can be ...
Andrean Goede, Ines S. Jaeger, Robert Preissner
PKDD
2005
Springer
105views Data Mining» more  PKDD 2005»
13 years 11 months ago
Protein Sequence Pattern Mining with Constraints
Considering the characteristics of biological sequence databases, which typically have a small alphabet, a very long length and a relative small size (several hundreds of sequences...
Pedro Gabriel Ferreira, Paulo J. Azevedo
BMCBI
2004
93views more  BMCBI 2004»
13 years 5 months ago
Predicting binding sites of hydrolase-inhibitor complexes by combining several methods
Background: Protein-protein interactions play a critical role in protein function. Completion of many genomes is being followed rapidly by major efforts to identify interacting pr...
Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jerni...