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» Mining sequential patterns for protein fold recognition
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JBI
2008
137views Bioinformatics» more  JBI 2008»
13 years 4 months ago
Mining sequential patterns for protein fold recognition
Protein data contain discriminative patterns that can be used in many beneficial applications if they are defined correctly. In this work sequential pattern mining (SPM) is utiliz...
Themis P. Exarchos, Costas Papaloukas, Christos La...
FLAIRS
2008
13 years 7 months ago
Contrast Pattern Mining with Gap Constraints for Peptide Folding Prediction
1 In this paper, we propose a peptide folding prediction method which discovers contrast patterns to differentiate and predict peptide folding classes. A contrast pattern is defin...
Chinar C. Shah, Xingquan Zhu, Taghi M. Khoshgoftaa...
ALMOB
2007
170views more  ALMOB 2007»
13 years 4 months ago
A spatio-temporal mining approach towards summarizing and analyzing protein folding trajectories
Understanding the protein folding mechanism remains a grand challenge in structural biology. In the past several years, computational theories in molecular dynamics have been empl...
Hui Yang, Srinivasan Parthasarathy, Duygu Ucar
BIOINFORMATICS
2006
94views more  BIOINFORMATICS 2006»
13 years 4 months ago
Ensemble classifier for protein fold pattern recognition
Hong-Bin Shen, Kuo-Chen Chou
BMCBI
2007
151views more  BMCBI 2007»
13 years 4 months ago
Identification of hot regions in protein-protein interactions by sequential pattern mining
Background: Identification of protein interacting sites is an important task in computational molecular biology. As more and more protein sequences are deposited without available...
Chen-Ming Hsu, Chien-Yu Chen, Baw-Jhiune Liu, Chih...