16 search results - page 2 / 4 » Molecular Dynamics Simulations on Commodity GPUs with CUDA |
CLUSTER
2011
IEEE
12 years 4 months ago
2011
IEEE
Using multi-GPU systems, including GPU clusters, is gaining popularity in scientific computing. However, when using multiple GPUs concurrently, the conventional data parallel GPU...
BMCBI
2008
13 years 4 months ago
2008
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
FCCM
2004
IEEE
13 years 8 months ago
2004
IEEE
Current high-performance applications are typically implemented on large-scale general-purpose distributed or multiprocessing systems often based on commodity microprocessors. Fie...
IPPS
2010
IEEE
13 years 2 months ago
2010
IEEE
The advent of general purpose graphics processing units (GPGPU's) brings about a whole new platform for running numerically intensive applications at high speeds. Their multi-...
FPL
2009
Springer
13 years 8 months ago
2009
Springer
The acceleration of molecular dynamics (MD) simulations using high performance reconfigurable computing (HPRC) has been much studied. Given the intense competition from multicore...