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BIODATAMINING
2008
135views more  BIODATAMINING 2008»
13 years 5 months ago
Fast Gene Ontology based clustering for microarray experiments
Background: Analysis of a microarray experiment often results in a list of hundreds of diseaseassociated genes. In order to suggest common biological processes and functions for t...
Kristian Ovaska, Marko Laakso, Sampsa Hautaniemi
WOB
2008
128views Bioinformatics» more  WOB 2008»
13 years 6 months ago
Tests for Gene Clusters Satisfying the Generalized Adjacency Criterion
Abstract. We study a parametrized definition of gene clusters that permits control over the trade-off between increasing gene content versus conserving gene order within a cluster....
Ximing Xu, David Sankoff
BMCBI
2006
203views more  BMCBI 2006»
13 years 5 months ago
Independent component analysis reveals new and biologically significant structures in micro array data
Background: An alternative to standard approaches to uncover biologically meaningful structures in micro array data is to treat the data as a blind source separation (BSS) problem...
Attila Frigyesi, Srinivas Veerla, David Lindgren, ...
CVPR
2011
IEEE
13 years 1 months ago
Generalized Projection Based M-Estimator: Theory and Applications
We introduce a robust estimator called generalized projection based M-estimator (gpbM) which does not require the user to specify any scale parameters. For multiple inlier structu...
Sushil Mittal, Saket Anand, Peter Meer
BMCBI
2011
13 years 1 days ago
A novel approach to the clustering of microarray data via nonparametric density estimation
Background: Cluster analysis is a crucial tool in several biological and medical studies dealing with microarray data. Such studies pose challenging statistical problems due to di...
Riccardo De Bin, Davide Risso