9 search results - page 2 / 2 » Multithreaded comparative RNA secondary structure prediction... |
BMCBI
2005
13 years 4 months ago
2005
Background: Ambiguity is a problem in biosequence analysis that arises in various analysis tasks solved via dynamic programming, and in particular, in the modeling of families of ...
APBC
2004
13 years 6 months ago
2004
Pseudoknots are widely occurring structural motifs in RNA. Pseudoknots have been shown to be functionally important in different RNAs which play regulatory, catalytic, or structur...
BMCBI
2005
13 years 4 months ago
2005
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
ISMB
1994
13 years 6 months ago
1994
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...