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» On the Approximability of Comparing Genomes with Duplicates
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WALCOM
2008
IEEE
94views Algorithms» more  WALCOM 2008»
13 years 6 months ago
On the Approximability of Comparing Genomes with Duplicates
Sébastien Angibaud, Guillaume Fertin, Irena...
CSB
2005
IEEE
109views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Patterns of Gene Deletion following Genome Duplication in Yeast
Whole genome duplication (WGD) is followed by massive duplicate deletion that reorganizes gene adjacencies. We compare the deletion patterns and adjacency reorganization following...
Jake K. Byrnes, Wen-Hsiung Li
CSB
2003
IEEE
106views Bioinformatics» more  CSB 2003»
13 years 10 months ago
Reconstruction of Ancestral Gene Order after Segmental Duplication and Gene Loss
As gene order evolves through a variety of chromosomal rearrangements, conserved segments provide important insight into evolutionary relationships and functional roles of genes. ...
Jun Huan, Jan Prins, Wei Wang 0010, Todd J. Vision
BIOINFORMATICS
2004
52views more  BIOINFORMATICS 2004»
13 years 4 months ago
A comparative phylogenetic approach for dating whole genome duplication events
Brad A. Chapman, John E. Bowers, Stefan R. Schulze...
RECOMB
2010
Springer
13 years 3 months ago
An Approximation Algorithm for Computing a Parsimonious First Speciation in the Gene Duplication Model
We consider the following problem: given a forest of gene family trees on a set of genomes, find a first speciation which splits these genomes into two subsets and minimizes the ...
Aïda Ouangraoua, Krister M. Swenson, Cedric C...