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BMCBI
2005
84views more  BMCBI 2005»
13 years 6 months ago
A method of precise mRNA/DNA homology-based gene structure prediction
Background: Accurate and automatic gene finding and structural prediction is a common problem in bioinformatics, and applications need to be capable of handling non-canonical spli...
Alexander G. Churbanov, Mark Pauley, Daniel Quest,...
BMCBI
2008
108views more  BMCBI 2008»
13 years 6 months ago
A nonparametric model for quality control of database search results in shotgun proteomics
Background: Analysis of complex samples with tandem mass spectrometry (MS/MS) has become routine in proteomic research. However, validation of database search results creates a bo...
Jiyang Zhang, Jianqi Li, Xin Liu, Hongwei Xie, Yun...
PRIB
2010
Springer
176views Bioinformatics» more  PRIB 2010»
13 years 3 months ago
An On/Off Lattice Approach to Protein Structure Prediction from Contact Maps
Abstract. An important unsolved problem in structural bioinformatics is that of protein structure prediction (PSP), the reconstruction of a biologically plausible three-dimensional...
Stefano Teso, Cristina Di Risio, Andrea Passerini,...
IJHPCA
2006
109views more  IJHPCA 2006»
13 years 6 months ago
A Resource Leasing Policy for on-Demand Computing
Leasing computational resources for on-demand computing is now a viable option for providers of network services. Temporary spikes or lulls in demand for a service can be accommod...
Darin England, Jon B. Weissman
BMCBI
2005
162views more  BMCBI 2005»
13 years 6 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes