54 search results - page 1 / 11 » PSI: indexing protein structures for fast similarity search |
ISMB
2003
13 years 6 months ago
2003
We consider the problem of finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements). Later, ...
BMCBI
2010
13 years 4 months ago
2010
Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
CIBCB
2009
IEEE
13 years 5 months ago
2009
IEEE
Protein structure similarity and classification methods have many applications in protein function prediction and associated fields (e.g. drug discovery). In this paper, we propose...
CSB
2003
IEEE
13 years 9 months ago
2003
IEEE
We propose two methods for finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements) of prote...
BIBE
2003
IEEE
13 years 9 months ago
2003
IEEE
We present a multi-dimensional indexing approach for fast sequence similarity search in DNA and protein databases. In particular, we propose effective transformations of subsequen...