When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
High-dimensional indexing has been very popularly used for performing similarity search over various data types such as multimedia (audio/image/video) databases, document collectio...
Rahul Malik, Sangkyum Kim, Xin Jin, Chandrasekar R...
ibe an abstract data model of protein structures by representing the geometry of proteins using spatial data types and present a framework for fast structural similarity search bas...
It is shown that structural similarity between proteins can be decided well with much less information than what is used in common similarity measures. The full C representation c...
Background: Protein structural data has increased exponentially, such that fast and accurate tools are necessary to access structure similarity search. To improve the search speed...