18 search results - page 1 / 4 » PatternHunter: faster and more sensitive homology search |
BIOINFORMATICS
2002
13 years 5 months ago
2002
BIBE
2004
IEEE
13 years 9 months ago
2004
IEEE
Biologists highly rely on good algorithms for finding homologous regions in bimolecular sequences. An advanced homology search program named PatternHunter has recently been develo...
NAR
2007
13 years 4 months ago
2007
COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
BIBE
2005
IEEE
13 years 11 months ago
2005
IEEE
PSI-BLAST remains one of the popular tools for searching remote homologs in sequence databases. We recently demonstrated that hybrid alignment can function as the alignment core f...
BMCBI
2010
13 years 5 months ago
2010
Background: Profile hidden Markov models (profile-HMMs) are sensitive tools for remote protein homology detection, but the main scoring algorithms, Viterbi or Forward, require con...