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SODA
2001
ACM
79views Algorithms» more  SODA 2001»
13 years 6 months ago
Performance study of phylogenetic methods: (unweighted) quartet methods and neighbor-joining
Katherine St. John, Tandy Warnow, Bernard M. E. Mo...
JCB
2008
71views more  JCB 2008»
13 years 5 months ago
Short Quartet Puzzling: A New Quartet-Based Phylogeny Reconstruction Algorithm
Quartet-based phylogeny reconstruction methods, such as Quartet Puzzling, were introduced in the hope that they might be competitive with maximum likelihood methods, without being...
Sagi Snir, Tandy Warnow, Satish Rao
BIBE
2003
IEEE
13 years 10 months ago
An Investigation of Phylogenetic Likelihood Methods
Abstract— We analyze the performance of likelihoodbased approaches used to reconstruct phylogenetic trees. Unlike other techniques such as Neighbor-Joining (NJ) and Maximum Parsi...
Tiffani L. Williams, Bernard M. E. Moret
BMCBI
2008
86views more  BMCBI 2008»
13 years 5 months ago
Predicting protein linkages in bacteria: Which method is best depends on task
Background: Applications of computational methods for predicting protein functional linkages are increasing. In recent years, several bacteria-specific methods for predicting link...
Anis Karimpour-Fard, Sonia M. Leach, Ryan T. Gill,...