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    BMCBI
    2007
    165views more  BMCBI 2007»
    Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
    13 years 5 months ago
    Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
    Download  www.biomedcentral.com
    Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
    Carlos Rodríguez Penagos, Heladia Salgado, ...
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    NAR
    2011
    224views Computer Vision» more  NAR 2011»
    KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and meta
    12 years 8 months ago
    KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and meta
    Download  nar.oxfordjournals.org
    Correlations of gene-to-gene co-expression and metabolite-to-metabolite co-accumulation calculated from large amounts of transcriptome and metabolome data are useful for uncoverin...
    Nozomu Sakurai, Takeshi Ara, Yoshiyuki Ogata, Ryos...
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    NAR
    2007
    155views more  NAR 2007»
    AthaMap web tools for the analysis and identification of co-regulated genes
    13 years 5 months ago
    AthaMap web tools for the analysis and identification of co-regulated genes
    Download  www.athamap.de
    The AthaMap database generates a map of cisregulatory elements for the whole Arabidopsis thaliana genome. This database has been extended by new tools to identify common cis-regul...
    Claudia Galuschka, Martin Schindler, Lorenz Bü...
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    ISMB
    2000
    189views Computational Biology» more  ISMB 2000»
    Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data
    13 years 6 months ago
    Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data
    Download  cbit.snu.ac.kr
    We have developed a set of methods and tools for automatic discovery of putative regulatory signals in genome sequences. The analysis pipeline consists of gene expression data clu...
    Jaak Vilo, Alvis Brazma, Inge Jonassen, Alan J. Ro...
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