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» Probe Design for Compressive Sensing DNA Microarrays
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BIBM
2008
IEEE
159views Bioinformatics» more  BIBM 2008»
13 years 11 months ago
Probe Design for Compressive Sensing DNA Microarrays
Abstract—Compressive Sensing Microarrays (CSM) are DNAbased sensors that operate using group testing and compressive sensing (CS) principles. In contrast to conventional DNA micr...
Wei Dai, Olgica Milenkovic, Mona A. Sheikh, Richar...
IPPS
2003
IEEE
13 years 10 months ago
Accurate Method for Fast Design of Diagnostic Oligonucleotide Probe Sets for DNA Microarrays
We present a method for the automatic generation of oligonucleotide probe sets for DNA microarrays. This approach is well suited particularly for specificity evaluation of design...
Andreas Krause, Markus Kräutner, Harald Meier
BMCBI
2006
127views more  BMCBI 2006»
13 years 4 months ago
Improvement in the Reproducibility and Accuracy of DNA Microarray Quantification by Optimizing Hybridization Conditions
Background: DNA microarrays, which have been increasingly used to monitor mRNA transcripts at a global level, can provide detailed insight into cellular processes involved in resp...
Tao Han, Cathy D. Melvin, Leming M. Shi, William S...
BMCBI
2010
114views more  BMCBI 2010»
13 years 4 months ago
Detecting variants with Metabolic Design, a new software tool to design probes for explorative functional DNA microarray develop
Background: Microorganisms display vast diversity, and each one has its own set of genes, cell components and metabolic reactions. To assess their huge unexploited metabolic poten...
Sébastien Terrat, Eric Peyretaillade, Olivi...
BMCBI
2008
83views more  BMCBI 2008»
13 years 4 months ago
A Java-based tool for the design of classification microarrays
Background: Classification microarrays are used for purposes such as identifying strains of bacteria and determining genetic relationships to understand the epidemiology of an inf...
Da Meng, Shira L. Broschat, Douglas R. Call