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» Protein Fold Recognition with Combined SVM-RDA Classifier
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BICOB
2010
Springer
13 years 3 months ago
Multiple Kernel Learning for Fold Recognition
Fold recognition is a key problem in computational biology that involves classifying protein sharing structural similarities into classes commonly known as "folds". Rece...
Huzefa Rangwala
BIOINFORMATICS
2006
94views more  BIOINFORMATICS 2006»
13 years 5 months ago
Ensemble classifier for protein fold pattern recognition
Hong-Bin Shen, Kuo-Chen Chou
ICML
2005
IEEE
14 years 6 months ago
Multi-class protein fold recognition using adaptive codes
We develop a novel multi-class classification method based on output codes for the problem of classifying a sequence of amino acids into one of many known protein structural class...
Eugene Ie, Jason Weston, William Stafford Noble, C...
BMCBI
2007
93views more  BMCBI 2007»
13 years 5 months ago
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition
Background: Predicting a protein’s structural class from its amino acid sequence is a fundamental problem in computational biology. Much recent work has focused on developing ne...
Iain Melvin, Eugene Ie, Rui Kuang, Jason Weston, W...
ECML
2005
Springer
13 years 11 months ago
Fast Non-negative Dimensionality Reduction for Protein Fold Recognition
Abstract. In this paper, dimensionality reduction via matrix factorization with nonnegativity constraints is studied. Because of these constraints, it stands apart from other linea...
Oleg Okun, Helen Priisalu, Alexessander Alves